Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6888

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6887: 15255 - KOG2793 Putative N2,N2-dimethylguanosine tRNA methyltransferase, at 358644 to 359526 15255 mRNA_6888: 15256 - K04422 MAP3K13, LZK mitogen-activated protein kinase kinase kinase 13, at 359759 to 363523 15256 mRNA_6889: 15257 - K17065 DNM1L dynamin 1-like protein, at 364003 to 366716 15257

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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358,801 - 15255 mRNA_6887 0.18 -0.1
359,074 + 15255 mRNA_6887 0.49 0.3
359,368 - 15255 mRNA_6887 0.82 0.5
359,535 - -0.0
359,626 + 1.1
359,643 + 0.6
359,666 + -0.4
359,767 + 0.2
359,771 - 0.6
361,421 - 15256 mRNA_6888 0.44 -0.1
363,084 - 15256 mRNA_6888 0.88 0.5
363,175 - -0.1
363,198 - -1.2
363,331 + 0.3
363,775 + 0.3
363,780 + 0.9
363,785 - -0.3
363,785 - 0.7
363,786 - -0.2
363,788 - -0.2
363,788 + 0.5
363,846 - 1.3
363,849 + 0.7
363,970 - 0.6