Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6880

Experiments: 40 hrs Median Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6879: 15247 - KOG0293 WD40 repeat-containing protein, at 339326 to 341674 15247 mRNA_6880: 15248 - K00641 metX homoserine O-acetyltransferase, at 342593 to 344205 15248 mRNA_6881: 15249 - Hypothetical Protein, at 344637 to 347114 15249

Fetching data...

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
remove
341,596 + 1.6
341,607 - -0.6
341,730 - 0.4
341,741 + 0.7
341,752 - 0.6
341,756 + -0.6
341,904 + 0.5
342,053 + 2.0
342,058 + 1.4
342,188 - -0.9
342,188 - 1.1
342,195 + -0.2
342,198 - 0.1
342,211 + 0.4
342,233 + 0.4
342,347 + 0.3
342,347 + 0.1
342,357 - 0.5
342,361 - 0.3
342,371 + -0.4
342,508 - 0.2
342,533 + -0.4
342,636 - -1.0
342,660 + 1.8
342,786 + 15248 mRNA_6880 0.12 -0.1
343,237 - 15248 mRNA_6880 0.40 -1.1
343,385 + 15248 mRNA_6880 0.49 -0.6
343,753 + 15248 mRNA_6880 0.72 0.9
343,801 - 15248 mRNA_6880 0.75 -0.1
343,821 - 15248 mRNA_6880 0.76 0.4
343,982 - 15248 mRNA_6880 0.86 0.5
344,024 - 15248 mRNA_6880 0.89 1.0
344,110 - 0.4
344,127 - -0.6
344,129 - 0.2
344,141 + -0.2
344,314 + 0.2
344,422 + 0.6
344,423 + 0.5
344,428 + 3.0
344,430 + 0.7
344,453 - 0.6
344,462 + 0.1
344,463 - 0.2
344,470 + -0.3
344,475 + -0.0
344,546 - 1.3
344,551 + 0.4
344,585 + 0.4
344,585 + 0.7
344,587 + -0.3
344,587 + -0.2
344,615 - 0.1
344,713 + 0.3
344,726 + 0.1
345,068 + 15249 mRNA_6881 0.17 0.1
345,145 - 15249 mRNA_6881 0.21 0.1
345,178 + 15249 mRNA_6881 0.22 0.4
345,198 + 15249 mRNA_6881 0.23 0.2
345,199 + 15249 mRNA_6881 0.23 0.1