Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6750

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6749: 15117 - Hypothetical Protein, at 54204 to 55988 15117 mRNA_6750: 15118 - SUPERFAMILY--SSF47473, at 56227 to 57172 15118 mRNA_6751: 15119 - K10578 UBE2J1, NCUBE1, UBC6 ubiquitin-conjugating enzyme E2 J1, at 57250 to 58945 15119

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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55,248 - 15117 mRNA_6749 0.58 -0.4
55,265 + 15117 mRNA_6749 0.59 0.6
55,366 + 15117 mRNA_6749 0.65 0.8
55,377 + 15117 mRNA_6749 0.66 -0.1
55,411 - 15117 mRNA_6749 0.68 -0.3
55,418 + 15117 mRNA_6749 0.68 -0.0
55,684 + 15117 mRNA_6749 0.83 0.8
55,702 + 15117 mRNA_6749 0.84 0.1
55,734 - 15117 mRNA_6749 0.86 -0.9
55,741 - 15117 mRNA_6749 0.86 1.3
55,797 + 15117 mRNA_6749 0.89 0.3
55,847 + 2.0
55,883 + 0.5
55,973 - 0.3
55,979 - -0.5
55,988 - 0.5
55,988 - 0.8
55,993 + 0.7
56,081 + 0.0
56,130 - 0.2
56,133 + 1.0
56,135 - 1.8
56,257 - 0.5
56,312 + 0.8
56,430 + 15118 mRNA_6750 0.21 0.0
56,442 + 15118 mRNA_6750 0.23 1.2
56,445 - 15118 mRNA_6750 0.23 0.1
56,570 - 15118 mRNA_6750 0.36 1.0
56,576 - 15118 mRNA_6750 0.37 0.1
56,586 + 15118 mRNA_6750 0.38 -0.5
56,588 + 15118 mRNA_6750 0.38 0.1
56,589 + 15118 mRNA_6750 0.38 0.1
56,606 + 15118 mRNA_6750 0.40 1.3
56,627 + 15118 mRNA_6750 0.42 -0.9
56,713 - 15118 mRNA_6750 0.51 0.2
57,300 + 1.0
57,303 + -0.6
57,312 - 0.4
57,596 - 15119 mRNA_6751 0.20 -0.8
57,605 + 15119 mRNA_6751 0.21 -0.2
57,613 - 15119 mRNA_6751 0.21 0.4
57,617 + 15119 mRNA_6751 0.22 0.5
57,760 - 15119 mRNA_6751 0.30 -0.1
57,763 + 15119 mRNA_6751 0.30 0.1
57,763 + 15119 mRNA_6751 0.30 0.5
57,767 - 15119 mRNA_6751 0.30 0.0
57,896 - 15119 mRNA_6751 0.38 0.5