Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6748

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6747: 15115 - Hypothetical Protein, at 50840 to 52306 15115 mRNA_6748: 15116 - Hypothetical Protein, at 52794 to 54250 15116 mRNA_6749: 15117 - Hypothetical Protein, at 54204 to 55988 15117

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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52,031 + 15115 mRNA_6747 0.81 -0.0
52,236 + 0.7
52,262 - -0.3
52,360 + 0.2
52,381 + -0.9
52,493 - -0.1
52,496 + 0.8
52,517 + 0.8
52,660 + 0.1
52,665 + -0.4
52,667 - 0.8
52,776 - 0.7
52,806 + 1.1
52,889 - -0.3
52,936 - 0.6
53,065 - 15116 mRNA_6748 0.19 -0.7
53,090 + 15116 mRNA_6748 0.20 1.0
53,405 + 15116 mRNA_6748 0.42 0.2
53,511 - 15116 mRNA_6748 0.49 0.4
53,538 - 15116 mRNA_6748 0.51 0.2
53,654 + 15116 mRNA_6748 0.59 0.8
53,697 - 15116 mRNA_6748 0.62 -0.2
53,769 - 15116 mRNA_6748 0.67 -0.0
53,815 + 15116 mRNA_6748 0.70 0.6
53,974 + 15116 mRNA_6748 0.81 1.3
54,061 - 15116 mRNA_6748 0.87 -1.6
54,153 + -0.8
54,245 + -1.2
54,249 + 0.8
54,266 - 0.5
54,269 + 0.1
54,328 - 0.8
54,398 - 15117 mRNA_6749 0.11 1.8
54,415 + 15117 mRNA_6749 0.12 0.4
54,420 + 15117 mRNA_6749 0.12 -0.2
54,427 - 15117 mRNA_6749 0.12 0.2
54,430 + 15117 mRNA_6749 0.13 0.7
54,636 + 15117 mRNA_6749 0.24 1.6
54,873 - 15117 mRNA_6749 0.37 0.9
54,981 - 15117 mRNA_6749 0.44 1.4
55,030 + 15117 mRNA_6749 0.46 0.6
55,033 - 15117 mRNA_6749 0.46 -0.6
55,094 - 15117 mRNA_6749 0.50 0.0
55,135 - 15117 mRNA_6749 0.52 0.1
55,248 - 15117 mRNA_6749 0.58 -0.4