Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6733

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6733: 15101 - KOG4412 26S proteasome regulatory complex, subunit PSMD10, at 20964 to 21791 15101 mRNA_6734: 15102 - Hypothetical Protein, at 21925 to 24629 15102

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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19,984 + 0.2
19,992 + -0.7
20,004 - 0.9
20,137 - -0.9
20,171 + 0.5
20,288 + 0.2
20,457 - -0.6
20,539 + 2.1
20,571 + -0.5
20,585 - 0.5
20,586 + 1.7
20,597 - 1.2
20,604 + -1.1
20,604 + 0.5
20,632 + -1.1
20,723 - 0.6
20,735 - 1.1
20,766 + 0.0
20,777 - 0.7
20,786 + -0.3
20,922 + 0.3
21,068 - 15101 mRNA_6733 0.13 0.5
21,083 + 15101 mRNA_6733 0.14 -0.2
21,112 + 15101 mRNA_6733 0.18 0.8
21,192 + 15101 mRNA_6733 0.28 0.9
21,204 - 15101 mRNA_6733 0.29 1.1
21,226 + 15101 mRNA_6733 0.32 1.4
21,348 - 15101 mRNA_6733 0.46 0.2
21,502 - 15101 mRNA_6733 0.65 0.8
21,506 - 15101 mRNA_6733 0.65 -0.5
21,934 + 1.7
22,070 + 0.1
22,246 - 15102 mRNA_6734 0.12 1.3
22,246 + 15102 mRNA_6734 0.12 2.1
22,363 - 15102 mRNA_6734 0.16 1.0
22,588 + 15102 mRNA_6734 0.25 0.1
22,729 + 15102 mRNA_6734 0.30 -0.5