Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6726

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6725: 15093 - K07575 K07575 PUA domain protein, at 176 to 1349 15093 mRNA_6726: 15094 - Hypothetical Protein, at 1736 to 3438 15094 mRNA_6727: 15095 - K00761 upp, UPRT uracil phosphoribosyltransferase, at 3595 to 4704 15095

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,318 - 1.0
1,688 + -0.5
1,688 + 0.2
1,714 - -0.9
1,889 - 0.2
1,889 - 0.8
2,290 + 15094 mRNA_6726 0.33 0.2
2,349 - 15094 mRNA_6726 0.36 1.0
2,383 - 15094 mRNA_6726 0.38 1.3
2,391 - 15094 mRNA_6726 0.38 -0.6
2,422 - 15094 mRNA_6726 0.40 0.1
2,442 - 15094 mRNA_6726 0.41 0.8
2,472 + 15094 mRNA_6726 0.43 0.5
2,475 - 15094 mRNA_6726 0.43 1.9
2,531 - 15094 mRNA_6726 0.47 0.1
2,889 - 15094 mRNA_6726 0.68 0.1
2,898 + 15094 mRNA_6726 0.68 0.4
2,928 + 15094 mRNA_6726 0.70 0.0
2,957 - 15094 mRNA_6726 0.72 0.7
3,026 + 15094 mRNA_6726 0.76 0.4
3,149 + 15094 mRNA_6726 0.83 0.3
3,291 + -0.1
3,296 - -0.7
3,335 + 0.4
3,462 + 1.1
3,566 - 0.4
3,745 + 15095 mRNA_6727 0.14 -0.1
3,751 - 15095 mRNA_6727 0.14 -0.0
3,878 + 15095 mRNA_6727 0.25 0.4
4,005 + 15095 mRNA_6727 0.37 0.5