Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6719

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6718: 15086 - K13711 PI4K2 phosphatidylinositol 4-kinase type 2, at 1526282 to 1529015 15086 mRNA_6719: 15087 - Hypothetical Protein, at 1530010 to 1530905 15087 mRNA_6720: 15088 - K11293 HIRA, HIR1 protein HIRA/HIR1, at 1531665 to 1535330 15088

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,529,086 - -0.8
1,529,114 + -1.7
1,529,168 + 0.4
1,529,201 - 0.1
1,529,270 + -0.2
1,529,273 + 0.1
1,529,794 + 0.3
1,529,796 - 1.0
1,530,119 - 15087 mRNA_6719 0.12 0.7
1,530,412 + 15087 mRNA_6719 0.45 -0.2
1,530,512 - 15087 mRNA_6719 0.56 0.2
1,530,538 + 15087 mRNA_6719 0.59 0.5
1,530,640 - 15087 mRNA_6719 0.70 0.5
1,530,709 - 15087 mRNA_6719 0.78 0.8
1,530,975 - 0.3
1,530,994 + 0.2
1,530,998 - 0.2
1,531,080 - -0.3
1,531,126 + -0.4
1,531,150 + 1.1
1,531,158 + -0.6
1,531,163 - 0.3
1,531,237 + 0.4
1,531,285 + 0.1
1,531,293 - 0.5
1,531,304 + 0.4
1,531,305 - 2.2
1,531,308 + 0.9
1,531,309 - -0.7
1,531,309 - 0.9
1,531,420 + 0.8
1,531,422 - -0.3
1,531,423 + 0.9
1,531,449 - -0.2
1,531,460 - 1.2
1,531,460 + -1.0
1,531,466 + 0.4
1,531,466 + 0.8
1,531,466 + 0.8
1,531,466 + 0.5
1,531,484 + 0.5
1,531,581 - 0.1
1,531,582 + 0.8