Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6687

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6686: 15054 - K02875 RP-L14e, RPL14 large subunit ribosomal protein L14e, at 1439668 to 1440386 15054 mRNA_6687: 15055 - BLAST Wings apart-like protein [Xanthophyllomyces dendrorhous], at 1440817 to 1442910 15055 mRNA_6688: 15056 - BLAST Wings apart-like protein [Ceraceosorus bombacis], at 1443197 to 1445162 15056

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,440,454 - 0.1
1,440,587 + 1.0
1,440,590 - 0.1
1,440,596 + 0.1
1,440,608 - 0.3
1,440,614 - -0.1
1,440,748 - -0.4
1,440,872 - 0.1
1,441,166 + 15055 mRNA_6687 0.17 1.1
1,442,166 - 15055 mRNA_6687 0.64 1.1
1,443,637 - 15056 mRNA_6688 0.22 0.4
1,443,775 - 15056 mRNA_6688 0.29 -1.2