Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6642

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6641: 15009 - K11863 ATXN3, MJD Ataxin-3, at 1326359 to 1327984 15009 mRNA_6642: 15010 - KOG2684 Sirtuin 5 and related class III sirtuins (SIR2 family), at 1328184 to 1330070 15010 mRNA_6643: 15011 - KOG2983 Uncharacterized conserved protein, at 1330275 to 1331625 15011

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,327,234 - 15009 mRNA_6641 0.54 0.3
1,327,653 - 15009 mRNA_6641 0.80 0.5
1,327,800 + 15009 mRNA_6641 0.89 0.9
1,327,803 - 15009 mRNA_6641 0.89 1.5
1,327,834 - -0.1
1,327,840 + -0.2
1,328,076 + -0.5
1,328,113 - 0.3
1,328,140 - 0.6
1,328,272 - 1.6
1,328,289 + -0.3
1,328,409 - 15010 mRNA_6642 0.12 0.0
1,328,565 + 15010 mRNA_6642 0.20 -0.1
1,328,575 + 15010 mRNA_6642 0.21 0.0
1,328,614 - 15010 mRNA_6642 0.23 0.4
1,328,738 + 15010 mRNA_6642 0.29 0.0
1,329,029 + 15010 mRNA_6642 0.45 0.0
1,329,051 + 15010 mRNA_6642 0.46 0.3
1,329,058 + 15010 mRNA_6642 0.46 0.7
1,329,149 - 15010 mRNA_6642 0.51 0.2
1,329,167 - 15010 mRNA_6642 0.52 -0.7
1,329,186 + 15010 mRNA_6642 0.53 1.1
1,329,282 - 15010 mRNA_6642 0.58 -0.1
1,329,422 - 15010 mRNA_6642 0.66 1.6