Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6611

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6610: 14978 - BLAST related to MSL5-branch point bridging protein [Sporis..., at 1239560 to 1240604 14978 mRNA_6611: 14979 - K03849 ALG8 alpha-1,3-glucosyltransferase, at 1240935 to 1243204 14979 mRNA_6612: 14980 - Hypothetical Protein, at 1243315 to 1245025 14980

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,240,459 - 14978 mRNA_6610 0.86 -1.2
1,240,771 - 0.0
1,240,880 - -0.0
1,240,891 + 1.0
1,240,900 + -0.1
1,240,919 + -0.6
1,241,061 + -0.5
1,241,067 - 0.7
1,241,176 + 14979 mRNA_6611 0.11 0.2
1,241,233 - 14979 mRNA_6611 0.13 0.4
1,241,336 + 14979 mRNA_6611 0.18 -0.1
1,241,385 + 14979 mRNA_6611 0.20 0.5
1,241,421 + 14979 mRNA_6611 0.21 -0.5
1,241,661 - 14979 mRNA_6611 0.32 0.8
1,241,945 + 14979 mRNA_6611 0.44 0.6
1,242,985 - -0.9
1,243,368 + 0.8
1,243,793 + 14980 mRNA_6612 0.28 0.7
1,243,860 + 14980 mRNA_6612 0.32 -0.1
1,244,174 - 14980 mRNA_6612 0.50 0.9