Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6585

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6585: 14953 - K14850 RRP8 ribosomal RNA-processing protein 8, at 1161418 to 1162965 14953 mRNA_6586: 14954 - SUPERFAMILY--SSF55729, at 1163185 to 1164579 14954

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,160,464 + -0.7
1,160,475 - 0.4
1,160,510 + -0.4
1,160,591 + 0.8
1,160,598 - 0.9
1,160,632 + 0.9
1,160,754 - -0.2
1,160,763 + 0.2
1,160,772 + 2.2
1,160,784 - 0.2
1,160,801 + 0.2
1,160,802 + 1.2
1,160,915 - 0.4
1,160,915 - -0.1
1,161,064 + -1.6
1,161,072 - 0.1
1,161,080 + 0.2
1,161,098 + 0.3
1,161,217 - 0.7
1,161,229 + 0.5
1,161,239 + 0.6
1,161,240 - 0.6
1,161,242 - 0.3
1,161,262 - 0.8
1,161,399 - 0.3
1,161,429 + 2.1
1,161,662 + 14953 mRNA_6585 0.16 -0.1
1,161,662 + 14953 mRNA_6585 0.16 -0.8
1,162,234 - 14953 mRNA_6585 0.53 -0.3
1,162,420 + 14953 mRNA_6585 0.65 -0.2
1,162,667 - 14953 mRNA_6585 0.81 0.4
1,162,674 - 14953 mRNA_6585 0.81 -0.2
1,162,828 + 0.7
1,162,878 + 0.5
1,162,960 + 0.1
1,162,994 + 0.8
1,162,999 - 1.1
1,163,065 - 0.6
1,163,074 - 1.0
1,163,085 - 1.0
1,163,090 - 0.1
1,163,091 + 0.1
1,163,093 - -0.5
1,163,109 + -0.6
1,163,113 - 1.4
1,163,116 + 0.2
1,163,116 - -1.5
1,163,117 + 1.5
1,163,119 - 0.4
1,163,396 - 14954 mRNA_6586 0.15 0.6
1,163,404 + 14954 mRNA_6586 0.16 0.5
1,163,412 + 14954 mRNA_6586 0.16 0.1
1,163,416 - 14954 mRNA_6586 0.17 1.4
1,163,533 + 14954 mRNA_6586 0.25 0.8
1,163,855 + 14954 mRNA_6586 0.48 0.9