Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6567

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6566: 14934 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 1112309 to 1113884 14934 mRNA_6567: 14935 - KOG2662 Magnesium transporters CorA family, at 1114168 to 1116354 14935 mRNA_6568: 14936 - BLAST Protein IWS1 homolog A [Rhizoctonia solani], at 1116813 to 1120702 14936

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,113,213 + 14934 mRNA_6566 0.57 -0.1
1,113,294 - 14934 mRNA_6566 0.62 0.5
1,113,786 - 0.2
1,113,797 - -0.1
1,113,931 - 0.9
1,113,931 - 1.2
1,113,932 + 1.2
1,113,932 - 0.1
1,113,944 + 0.7
1,113,949 + 0.7
1,113,950 + 0.3
1,113,958 + 0.2
1,113,958 - 0.3
1,113,958 - -0.3
1,113,968 - -0.1
1,114,000 - 1.7
1,114,023 + 1.1
1,114,087 + 0.4
1,114,116 - 0.4
1,114,118 - -0.7
1,114,143 + 1.4
1,114,354 - -0.2
1,114,360 + 0.1
1,114,700 - 14935 mRNA_6567 0.24 -0.4
1,114,710 + 14935 mRNA_6567 0.25 0.3
1,115,013 - 14935 mRNA_6567 0.39 1.2
1,115,013 - 14935 mRNA_6567 0.39 0.1
1,115,013 + 14935 mRNA_6567 0.39 0.8
1,115,024 - 14935 mRNA_6567 0.39 0.3
1,115,692 - 14935 mRNA_6567 0.70 0.7
1,115,881 + 14935 mRNA_6567 0.78 -0.1
1,116,121 - 14935 mRNA_6567 0.89 0.3
1,116,152 + 0.7
1,116,153 + 1.4
1,116,286 - -0.8
1,116,291 + 0.9
1,116,299 - -1.0
1,116,438 - -0.4
1,116,441 - -1.5
1,116,750 + 0.1
1,116,755 - 0.1
1,116,775 - -0.1