Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6465

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6464: 14832 - KOG1609 Protein involved in mRNA turnover and stability, at 845418 to 846912 14832 mRNA_6465: 14833 - Hypothetical Protein, at 847070 to 847704 14833 mRNA_6466: 14834 - Hypothetical Protein, at 848394 to 849782 14834

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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846,116 + 14832 mRNA_6464 0.47 0.3
846,203 - 14832 mRNA_6464 0.53 1.0
846,484 - 14832 mRNA_6464 0.71 -0.5
846,502 - 14832 mRNA_6464 0.73 0.7
846,511 + 14832 mRNA_6464 0.73 0.0
846,635 - 14832 mRNA_6464 0.81 1.2
846,650 - 14832 mRNA_6464 0.82 0.9
846,653 - 14832 mRNA_6464 0.83 0.3
846,661 + 14832 mRNA_6464 0.83 -0.3
846,675 + 14832 mRNA_6464 0.84 1.5
846,806 + 0.2
846,811 + 0.1
846,828 + 0.8
847,056 + -0.2
847,494 + 14833 mRNA_6465 0.67 0.7
847,494 - 14833 mRNA_6465 0.67 0.1
847,530 + 14833 mRNA_6465 0.72 0.7
847,575 + 14833 mRNA_6465 0.80 2.6
847,634 + 14833 mRNA_6465 0.89 1.8
847,820 + 0.1
847,867 - 1.2
847,980 + 2.2
847,993 - -0.2
848,084 + 0.5
848,110 - -0.2
848,135 + 0.8
848,136 - 1.0
848,144 + 0.8
848,271 - 0.2
848,388 - -0.3
848,416 + 0.5
848,430 + 1.6
848,556 - 14834 mRNA_6466 0.12 1.7
848,559 - 14834 mRNA_6466 0.12 0.1
848,650 - 14834 mRNA_6466 0.18 0.4
848,674 - 14834 mRNA_6466 0.20 -0.4