Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6451

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6450: 14818 - Hypothetical Protein, at 821969 to 822682 14818 mRNA_6451: 14819 - Hypothetical Protein, at 823535 to 824941 14819 mRNA_6452: 14820 - Hypothetical Protein, at 825555 to 826689 14820

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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822,557 - 14818 mRNA_6450 0.82 -0.3
822,567 + 14818 mRNA_6450 0.84 -0.2
822,570 - 14818 mRNA_6450 0.84 -0.1
822,583 + 14818 mRNA_6450 0.86 1.4
822,601 + 14818 mRNA_6450 0.89 0.3
822,680 - -0.2
822,689 + 1.7
822,713 - 0.3
822,718 + 0.3
822,830 - 0.6
822,975 - 0.2
823,000 - 0.5
823,292 - 0.2
823,473 + 0.1
823,589 + 0.0
823,747 + 14819 mRNA_6451 0.15 -0.7
824,035 - 14819 mRNA_6451 0.36 -0.3
824,200 + 14819 mRNA_6451 0.47 0.7
824,201 - 14819 mRNA_6451 0.47 1.4
824,346 - 14819 mRNA_6451 0.58 -0.8
824,367 - 14819 mRNA_6451 0.59 0.7
824,371 + 14819 mRNA_6451 0.59 0.3
824,435 - 14819 mRNA_6451 0.64 1.2
824,442 + 14819 mRNA_6451 0.64 1.0
824,664 - 14819 mRNA_6451 0.80 -0.6
824,750 + 14819 mRNA_6451 0.86 -0.0
824,765 - 14819 mRNA_6451 0.87 0.4
825,032 + 0.2
825,034 - -1.0
825,037 + 0.0
825,041 - 1.2
825,044 + -0.1
825,129 - 0.1
825,206 + 0.8
825,213 + 0.2
825,223 - 1.8
825,328 + 0.2
825,345 + -1.1
825,345 + -0.1
825,397 - 0.5
825,510 + 0.7
825,510 - 0.8
825,552 - 0.7
825,632 + 0.4
825,665 - 0.7
825,754 - 14820 mRNA_6452 0.18 0.4
825,782 + 14820 mRNA_6452 0.20 -0.6
825,901 + 14820 mRNA_6452 0.30 0.5
825,908 - 14820 mRNA_6452 0.31 1.1
825,937 - 14820 mRNA_6452 0.34 0.4