Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6445

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6444: 14812 - Hypothetical Protein, at 808406 to 809831 14812 mRNA_6445: 14813 - KOG2896 UV radiation resistance associated protein, at 810637 to 814255 14813 mRNA_6446: 14814 - Hypothetical Protein, at 814402 to 816229 14814

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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809,998 - -0.5
810,031 - 0.0
810,202 + -0.4
810,226 - 0.8
810,488 - 0.6
810,541 - -0.6
810,889 - 0.4
810,934 + -0.6
810,989 - -0.6
811,032 - 14813 mRNA_6445 0.11 -0.1
811,040 + 14813 mRNA_6445 0.11 0.2
811,074 - 14813 mRNA_6445 0.12 0.2
811,090 + 14813 mRNA_6445 0.13 -0.2
811,238 + 14813 mRNA_6445 0.17 0.1
811,239 - 14813 mRNA_6445 0.17 0.6
811,388 + 14813 mRNA_6445 0.21 1.0
811,525 + 14813 mRNA_6445 0.25 0.2
811,609 + 14813 mRNA_6445 0.27 -0.0
811,722 - 14813 mRNA_6445 0.30 0.2
811,878 + 14813 mRNA_6445 0.34 0.8
811,921 - 14813 mRNA_6445 0.35 0.8
812,121 - 14813 mRNA_6445 0.41 -1.2
812,124 - 14813 mRNA_6445 0.41 1.2
812,133 - 14813 mRNA_6445 0.41 0.1
812,142 + 14813 mRNA_6445 0.42 0.5
812,142 + 14813 mRNA_6445 0.42 0.9
812,563 - 14813 mRNA_6445 0.53 -0.2
812,625 - 14813 mRNA_6445 0.55 0.2
812,704 - 14813 mRNA_6445 0.57 0.8
812,740 + 14813 mRNA_6445 0.58 -0.1
812,869 + 14813 mRNA_6445 0.62 -0.1
813,001 - 14813 mRNA_6445 0.65 0.4
813,327 - 14813 mRNA_6445 0.74 1.2
813,631 + 14813 mRNA_6445 0.83 0.1
813,643 + 14813 mRNA_6445 0.83 0.1
813,655 - 14813 mRNA_6445 0.83 -0.1
813,664 - 14813 mRNA_6445 0.84 0.4
813,810 - 14813 mRNA_6445 0.88 0.4
813,890 + 14813 mRNA_6445 0.90 0.2
813,922 + 0.6
813,929 + -0.2
813,989 - -0.4
814,010 + -0.0
814,041 - 0.0
814,055 - 0.5
814,072 + -0.5
814,076 - 0.4
814,196 - -0.5
814,209 + -0.1
814,211 + -0.3
814,222 + 0.7
814,317 - -0.9
814,335 + 1.0
814,357 + 1.0
814,364 - -0.3
814,487 - -0.1
814,500 - 0.6
814,717 - 14814 mRNA_6446 0.17 0.1
814,718 + 14814 mRNA_6446 0.17 0.1
814,742 - 14814 mRNA_6446 0.19 -0.3
814,796 + 14814 mRNA_6446 0.22 -0.2
814,881 - 14814 mRNA_6446 0.26 0.1
814,915 - 14814 mRNA_6446 0.28 0.5
814,920 + 14814 mRNA_6446 0.28 -0.7
814,977 - 14814 mRNA_6446 0.31 2.3
815,172 - 14814 mRNA_6446 0.42 0.1
815,247 + 14814 mRNA_6446 0.46 1.1