Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6444

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6443: 14811 - K10427 DCTN5 dynactin 5, at 806898 to 807775 14811 mRNA_6444: 14812 - Hypothetical Protein, at 808406 to 809831 14812 mRNA_6445: 14813 - KOG2896 UV radiation resistance associated protein, at 810637 to 814255 14813

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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808,173 - 1.5
808,265 + -0.1
808,321 + 0.1
808,383 - 1.0
808,401 + 0.4
808,412 + 1.3
808,422 - 1.0
808,439 + 1.3
808,534 - -1.2
808,560 - 14812 mRNA_6444 0.11 0.4
808,561 + 14812 mRNA_6444 0.11 0.1
808,699 + 14812 mRNA_6444 0.21 -0.9
808,706 + 14812 mRNA_6444 0.21 0.8
808,706 + 14812 mRNA_6444 0.21 0.5
808,886 + 14812 mRNA_6444 0.34 0.8
808,985 - 14812 mRNA_6444 0.41 -0.5
809,024 + 14812 mRNA_6444 0.43 -1.2
809,080 + 14812 mRNA_6444 0.47 -0.9
809,090 + 14812 mRNA_6444 0.48 -0.4
809,101 - 14812 mRNA_6444 0.49 0.1
809,103 + 14812 mRNA_6444 0.49 0.3
809,149 - 14812 mRNA_6444 0.52 0.0
809,150 + 14812 mRNA_6444 0.52 0.2
809,167 - 14812 mRNA_6444 0.53 0.8
809,167 + 14812 mRNA_6444 0.53 0.3
809,173 + 14812 mRNA_6444 0.54 -0.4
809,207 - 14812 mRNA_6444 0.56 0.1
809,347 - 14812 mRNA_6444 0.66 -0.1
809,418 - 14812 mRNA_6444 0.71 0.9
809,423 - 14812 mRNA_6444 0.71 0.0
809,426 - 14812 mRNA_6444 0.72 -0.5
809,426 - 14812 mRNA_6444 0.72 1.0
809,444 + 14812 mRNA_6444 0.73 0.2
809,462 - 14812 mRNA_6444 0.74 0.7
809,463 - 14812 mRNA_6444 0.74 0.5
809,468 + 14812 mRNA_6444 0.74 0.3
809,485 + 14812 mRNA_6444 0.76 1.5
809,508 + 14812 mRNA_6444 0.77 -0.2
809,508 + 14812 mRNA_6444 0.77 1.0
809,534 - 14812 mRNA_6444 0.79 0.1
809,601 + 14812 mRNA_6444 0.84 2.0
809,998 - -0.5
810,031 - 0.0
810,202 + -0.4
810,226 - 0.8
810,488 - 0.6
810,541 - -0.6