Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6427

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6426: 14794 - ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928, at 770724 to 773097 14794 mRNA_6427: 14795 - KOG0516 Dystonin, GAS (Growth-arrest-specific protein), and related proteins, at 773204 to 778326 14795 mRNA_6428: 14796 - KOG2208 Vigilin, at 779181 to 783068 14796

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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773,185 + 0.1
773,304 - 0.1
773,440 - 0.7
773,460 + 0.5
773,547 - 0.2
774,377 - 14795 mRNA_6427 0.23 0.2
774,483 - 14795 mRNA_6427 0.25 -0.5
774,604 + 14795 mRNA_6427 0.27 0.9
774,616 - 14795 mRNA_6427 0.28 -1.0
774,660 + 14795 mRNA_6427 0.28 0.8
774,663 - 14795 mRNA_6427 0.28 0.6
775,347 - 14795 mRNA_6427 0.42 -0.2
775,821 + 14795 mRNA_6427 0.51 0.8
776,386 + 14795 mRNA_6427 0.62 0.4
776,392 + 14795 mRNA_6427 0.62 0.1
776,477 + 14795 mRNA_6427 0.64 0.2
776,491 + 14795 mRNA_6427 0.64 -0.2
776,795 + 14795 mRNA_6427 0.70 -1.0
776,935 + 14795 mRNA_6427 0.73 0.5
776,983 + 14795 mRNA_6427 0.74 0.9
777,292 + 14795 mRNA_6427 0.80 0.3
777,298 - 14795 mRNA_6427 0.80 -0.6
777,520 + 14795 mRNA_6427 0.84 0.3
777,574 + 14795 mRNA_6427 0.85 0.8
777,790 + 14795 mRNA_6427 0.90 0.5
777,834 + 0.6
778,240 + -0.0
778,263 + 0.8
778,290 + 0.7
778,647 - 1.0
778,742 + 0.6
778,785 + 0.9
778,861 + 1.0
778,883 - 0.7
778,883 - 1.1
778,909 - -0.7
778,913 + 1.0
779,053 - 0.9