Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6408

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6407: 14775 - HMMPfam-Protein of unknown function (DUF952)-PF06108,SUPERFAMILY--SSF56399, at 739479 to 740196 14775 mRNA_6408: 14776 - K19308 BMT6 25S rRNA (uracil2843-N3)-methyltransferase, at 740308 to 741629 14776 mRNA_6409: 14777 - KOG2806 Chitinase, at 741880 to 743909 14777

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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739,509 + -0.9
739,858 - 14775 mRNA_6407 0.53 -0.3
739,922 + 14775 mRNA_6407 0.62 -0.1
740,097 + 14775 mRNA_6407 0.86 -0.9
740,109 + 14775 mRNA_6407 0.88 0.4
740,118 + 14775 mRNA_6407 0.89 0.4
740,245 + 0.1
740,256 + 0.5
740,536 + 14776 mRNA_6408 0.17 0.3
740,658 + 14776 mRNA_6408 0.26 1.7
740,682 + 14776 mRNA_6408 0.28 -0.3
740,829 - 14776 mRNA_6408 0.39 -1.7
741,116 + 14776 mRNA_6408 0.61 -0.8
741,148 + 14776 mRNA_6408 0.64 0.2
741,275 - 14776 mRNA_6408 0.73 -0.1
741,645 + 0.8
741,725 - 0.2
741,746 - -0.2
741,792 - 1.7
742,366 + 14777 mRNA_6409 0.24 0.6
742,415 + 14777 mRNA_6409 0.26 1.1
742,605 - 14777 mRNA_6409 0.36 0.8