Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6385

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6384: 14752 - K13201 TIA1, TIAL1 nucleolysin TIA-1/TIAR, at 685747 to 687315 14752 mRNA_6385: 14753 - K03107 SRP68 signal recognition particle subunit SRP68, at 687746 to 690070 14753 mRNA_6386: 14754 - KOG3043 Predicted hydrolase related to dienelactone hydrolase, at 690611 to 691768 14754

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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687,312 + -0.1
687,315 - -1.8
687,632 - 1.3
687,667 - 0.5
687,747 - -0.5
687,774 - 0.7
688,075 + 14753 mRNA_6385 0.14 1.1
689,813 - 14753 mRNA_6385 0.89 1.4
690,117 - 2.0
690,117 - -0.8
690,117 - 0.5
690,117 - 1.3
690,125 + 1.4
690,128 - 1.5
690,130 - 0.3
690,161 + 0.3
690,418 - -0.4
690,419 - 0.3
690,439 + 0.8
690,493 + 0.0
690,853 + 14754 mRNA_6386 0.21 -0.0
690,861 + 14754 mRNA_6386 0.22 -1.1