Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6355

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6354: 14722 - BLAST Mei2p [Pneumocystis carinii], at 616864 to 619118 14722 mRNA_6355: 14723 - KOG4532 WD40-like repeat containing protein, at 619648 to 622272 14723 mRNA_6356: 14724 - K01477 alc, ALLC allantoicase, at 622458 to 625058 14724

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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619,506 - 0.2
619,815 + 0.7
619,978 + 14723 mRNA_6355 0.13 -0.6
619,979 - 14723 mRNA_6355 0.13 -0.2
620,112 + 14723 mRNA_6355 0.18 -0.0
620,116 - 14723 mRNA_6355 0.18 0.4
620,861 + 14723 mRNA_6355 0.46 0.2
620,880 - 14723 mRNA_6355 0.47 -0.3
621,009 + 14723 mRNA_6355 0.52 1.7
621,459 + 14723 mRNA_6355 0.69 -0.6
621,609 - 14723 mRNA_6355 0.75 0.1
621,877 + 14723 mRNA_6355 0.85 0.1
622,314 - 0.4
622,329 - 0.5
622,329 - 0.4
622,340 + 0.4
622,368 + 0.8
622,369 - 0.5
622,935 - 14724 mRNA_6356 0.18 0.4
623,229 - 14724 mRNA_6356 0.30 -0.3