Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6346

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6345: 14713 - HMMPfam-START domain-PF01852,ProSiteProfiles-START domain profile.-PS50848,SUPERFAMILY--SSF55961, at 596038 to 599020 14713 mRNA_6346: 14714 - HMMPfam-Protein of unknown function (DUF938)-PF06080,SUPERFAMILY--SSF53335, at 599677 to 600627 14714 mRNA_6347: 14715 - Hypothetical Protein, at 601204 to 601756 14715

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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598,729 - 0.6
599,415 - 1.1
599,418 - -1.1
599,419 + 0.4
599,420 + 0.1
599,432 + 0.2
599,450 + 0.2
599,451 + -0.0
599,468 - -0.4
599,474 - 0.2
599,482 + 0.1
599,482 - -0.1
599,483 - 0.0
599,484 + -0.3
599,487 + 1.2
599,487 - -0.5
599,489 + 0.3
599,588 + 0.1
599,605 + 0.5
599,609 - 1.6
599,609 - 0.4
599,631 - 1.0
599,663 - 0.4
599,679 + -0.6
599,679 + -1.2
599,735 - 0.5
599,748 + 0.1
599,767 - -0.0
599,837 + 14714 mRNA_6346 0.17 1.8
599,854 + 14714 mRNA_6346 0.19 0.4
599,859 - 14714 mRNA_6346 0.19 -0.1
599,876 + 14714 mRNA_6346 0.21 1.8
599,877 - 14714 mRNA_6346 0.21 0.1
599,898 - 14714 mRNA_6346 0.23 0.3
600,039 - 14714 mRNA_6346 0.38 -0.5
600,514 + 14714 mRNA_6346 0.88 -0.0
600,514 + 14714 mRNA_6346 0.88 -0.2
600,618 - 0.2
601,040 + 2.0
601,193 + 0.9
601,341 + 14715 mRNA_6347 0.25 -0.3
601,464 - 14715 mRNA_6347 0.47 1.5
601,481 + 14715 mRNA_6347 0.50 0.5
601,487 - 14715 mRNA_6347 0.51 0.1