Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6335

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6334: 14702 - Hypothetical Protein, at 573693 to 575624 14702 mRNA_6335: 14703 - BLAST chloride channel protein 3 [Pseudozyma hubeiensis..., at 576114 to 577521 14703 mRNA_6336: 14704 - K14773 UTP23 U3 small nucleolar RNA-associated protein 23, at 577858 to 579187 14704

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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575,144 - 14702 mRNA_6334 0.75 0.9
575,255 + 14702 mRNA_6334 0.81 -0.5
575,390 + 14702 mRNA_6334 0.88 1.1
575,565 - -1.2
575,679 - -0.1
575,708 - 0.2
575,858 + 0.1
575,991 - 0.7
575,997 - -1.1
576,262 - 14703 mRNA_6335 0.11 0.7
576,595 - 14703 mRNA_6335 0.34 0.5
576,650 - 14703 mRNA_6335 0.38 -0.1
576,735 - 14703 mRNA_6335 0.44 0.3
576,743 + 14703 mRNA_6335 0.45 0.3
576,889 - 14703 mRNA_6335 0.55 1.0
576,909 - 14703 mRNA_6335 0.56 0.2
576,915 + 14703 mRNA_6335 0.57 1.3
577,141 - 14703 mRNA_6335 0.73 0.8
577,458 - 0.8
577,466 + -0.6
577,485 - 0.3
577,617 - -0.1
577,622 - 0.9
577,755 - 0.6
577,762 - 0.8
577,762 - 0.5
577,762 - 0.2
577,765 + 0.8
577,768 - -0.1