Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6329

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6328: 14696 - Hypothetical Protein, at 558019 to 558735 14696 mRNA_6329: 14697 - BLAST clp1-like protein [Moniliophthora roreri MCA 2997], at 559094 to 560421 14697 mRNA_6330: 14698 - K03119 tauD taurine dioxygenase, at 560667 to 562112 14698

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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558,096 - 14696 mRNA_6328 0.11 0.8
558,196 - 14696 mRNA_6328 0.25 0.4
558,339 + 14696 mRNA_6328 0.45 0.8
558,481 + 14696 mRNA_6328 0.64 -1.1
558,626 - 14696 mRNA_6328 0.85 0.6
558,742 - 0.3
558,750 + 0.2
558,776 - 0.9
558,890 + 0.1
559,016 - -0.5
559,125 - 0.2
559,219 - 0.1
559,226 + 0.8
559,229 - 14697 mRNA_6329 0.10 0.1
559,349 - 14697 mRNA_6329 0.19 0.8
559,352 - 14697 mRNA_6329 0.19 0.1
559,369 + 14697 mRNA_6329 0.21 -0.4
559,377 - 14697 mRNA_6329 0.21 0.3
559,383 - 14697 mRNA_6329 0.22 1.2
559,388 - 14697 mRNA_6329 0.22 -0.4
559,390 - 14697 mRNA_6329 0.22 -0.1
559,398 - 14697 mRNA_6329 0.23 -0.0
559,401 - 14697 mRNA_6329 0.23 0.6
559,570 + 14697 mRNA_6329 0.36 -0.3
559,599 - 14697 mRNA_6329 0.38 -0.8
559,794 - 14697 mRNA_6329 0.53 1.6
559,819 - 14697 mRNA_6329 0.55 -0.1
559,850 + 14697 mRNA_6329 0.57 2.0
559,968 - 14697 mRNA_6329 0.66 0.2
560,291 - 0.6
560,413 + 0.8
560,453 + -0.3
560,464 + 1.2
560,541 + 0.3
561,135 - 14698 mRNA_6330 0.32 -0.0
561,182 - 14698 mRNA_6330 0.36 0.4
561,184 - 14698 mRNA_6330 0.36 -1.1
561,189 - 14698 mRNA_6330 0.36 1.1
561,311 + 14698 mRNA_6330 0.45 1.1
561,327 - 14698 mRNA_6330 0.46 1.1