Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6326

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6325: 14693 - Hypothetical Protein, at 552273 to 554258 14693 mRNA_6326: 14694 - BLAST secreted protein [Melampsora larici-populina 98AG31], at 554507 to 555774 14694 mRNA_6327: 14695 - K13124 MORG1 mitogen-activated protein kinase organizer 1, at 555929 to 557274 14695

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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553,522 - 14693 mRNA_6325 0.63 0.2
553,545 - 14693 mRNA_6325 0.64 -0.7
553,546 + 14693 mRNA_6325 0.64 1.4
553,546 + 14693 mRNA_6325 0.64 0.4
553,546 - 14693 mRNA_6325 0.64 -0.1
553,548 - 14693 mRNA_6325 0.64 1.8
553,560 + 14693 mRNA_6325 0.65 0.3
553,582 + 14693 mRNA_6325 0.66 0.3
553,587 - 14693 mRNA_6325 0.66 0.6
553,592 - 14693 mRNA_6325 0.66 -1.0
553,595 - 14693 mRNA_6325 0.67 0.5
553,614 - 14693 mRNA_6325 0.68 0.2
553,623 + 14693 mRNA_6325 0.68 0.7
553,623 + 14693 mRNA_6325 0.68 0.2
553,629 - 14693 mRNA_6325 0.68 0.0
553,632 + 14693 mRNA_6325 0.68 -0.0
553,634 - 14693 mRNA_6325 0.69 2.0
553,647 - 14693 mRNA_6325 0.69 1.1
553,652 + 14693 mRNA_6325 0.69 -0.1
553,653 + 14693 mRNA_6325 0.69 0.7
553,657 + 14693 mRNA_6325 0.70 0.2
553,661 + 14693 mRNA_6325 0.70 0.4
553,670 + 14693 mRNA_6325 0.70 0.5
553,673 - 14693 mRNA_6325 0.70 0.4
553,673 + 14693 mRNA_6325 0.70 -0.4
553,687 + 14693 mRNA_6325 0.71 0.6
553,711 + 14693 mRNA_6325 0.72 0.2
553,728 + 14693 mRNA_6325 0.73 -0.0
553,730 + 14693 mRNA_6325 0.73 0.8
553,740 + 14693 mRNA_6325 0.74 0.3
553,762 + 14693 mRNA_6325 0.75 0.4
553,768 - 14693 mRNA_6325 0.75 0.2
553,774 - 14693 mRNA_6325 0.76 1.7
553,778 + 14693 mRNA_6325 0.76 0.4
553,779 - 14693 mRNA_6325 0.76 0.1
553,785 - 14693 mRNA_6325 0.76 0.2
553,786 + 14693 mRNA_6325 0.76 0.4
553,786 + 14693 mRNA_6325 0.76 -0.4
553,791 + 14693 mRNA_6325 0.76 -0.8
553,851 - 14693 mRNA_6325 0.79 0.6
553,866 - 14693 mRNA_6325 0.80 0.8
553,878 - 14693 mRNA_6325 0.81 -0.9
553,895 - 14693 mRNA_6325 0.82 0.3
553,923 + 14693 mRNA_6325 0.83 0.4
553,934 - 14693 mRNA_6325 0.84 0.8
553,945 - 14693 mRNA_6325 0.84 1.2
553,963 - 14693 mRNA_6325 0.85 1.0
553,978 + 14693 mRNA_6325 0.86 0.1
554,030 + 14693 mRNA_6325 0.88 -0.2
554,050 + 14693 mRNA_6325 0.89 0.7
554,055 - 14693 mRNA_6325 0.90 0.8
554,061 + 0.4
554,072 + -1.2
554,080 + -0.0
554,087 - -0.5
554,105 + -0.3
554,211 + -0.4
554,306 + 0.7
554,331 + 0.3
554,350 - 0.7
554,368 - -0.6
554,369 + 0.2
554,378 + -0.4
554,494 - 0.7
554,502 - 0.7
554,511 + -0.3
554,517 - 0.2
555,351 + 14694 mRNA_6326 0.67 -0.2
555,364 - 14694 mRNA_6326 0.68 0.6
555,668 + 0.6
555,679 - 1.3
555,813 + -0.7
555,827 + 0.2
555,844 + 0.2
555,855 - -0.2
555,878 + 0.4
556,083 + 14695 mRNA_6327 0.11 0.5
556,095 - 14695 mRNA_6327 0.12 0.7
556,380 + 14695 mRNA_6327 0.34 0.2
556,687 + 14695 mRNA_6327 0.56 0.1