Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6269

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6268: 14636 - HMMPfam-Survival motor neuron protein (SMN)-PF06003, at 404053 to 405342 14636 mRNA_6269: 14637 - KOG1336 Monodehydroascorbate/ferredoxin reductase, at 405556 to 407019 14637 mRNA_6270: 14638 - KOG2645 Type I phosphodiesterase/nucleotide pyrophosphatase, at 407745 to 410533 14638

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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405,337 + 1.6
405,603 + 0.3
405,631 - -0.3
405,763 - 14637 mRNA_6269 0.14 0.3
405,950 - 14637 mRNA_6269 0.27 1.5
406,061 - 14637 mRNA_6269 0.34 0.2
406,229 - 14637 mRNA_6269 0.46 1.3
406,775 + 14637 mRNA_6269 0.83 0.3
407,079 - -0.1
407,092 - 0.4
407,096 + -0.3
407,201 - 0.4
407,216 - 0.0
407,230 + -0.3
407,234 - 0.1
407,491 - 0.7
407,503 - 2.4
407,524 - -0.1
407,527 - 1.7
407,535 - 0.1
407,544 - -1.9
407,548 - 0.5
407,552 + 0.1
407,670 - 1.1
407,673 - 0.0
407,680 + 0.7
407,847 - 0.1
407,985 - 0.3
407,994 + 0.8
408,006 + 1.2