Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6263

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6263: 14631 - Hypothetical Protein, at 389857 to 392694 14631 mRNA_6264: 14632 - KOG1550 Extracellular protein SEL-1 and related proteins, at 392784 to 393598 14632

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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388,880 - -0.8
389,000 - 1.0
389,015 + 0.5
389,022 + -0.2
389,026 - 0.7
389,027 + 0.7
389,147 + 0.4
389,454 + 0.2
389,469 - 1.5
389,579 + 0.3
389,580 - 0.4
389,584 + 0.3
389,591 - 0.5
389,595 - 1.2
389,606 + 0.7
389,611 - 0.3
389,631 - 0.8
389,648 + -0.3
389,761 + 0.4
389,786 + 0.2
389,819 + -0.1
390,208 + 14631 mRNA_6263 0.12 -1.7
390,485 + 14631 mRNA_6263 0.22 -0.5
390,487 - 14631 mRNA_6263 0.22 0.3
390,733 - 14631 mRNA_6263 0.31 1.0
391,071 - 14631 mRNA_6263 0.43 0.3
391,505 - 14631 mRNA_6263 0.58 1.2
391,517 + 14631 mRNA_6263 0.58 0.8
391,551 + 14631 mRNA_6263 0.60 0.2
391,684 + 14631 mRNA_6263 0.64 0.5
391,924 - 14631 mRNA_6263 0.73 -0.4
392,268 + 14631 mRNA_6263 0.85 0.0
392,539 - -0.1
392,692 + 0.3
392,870 - 14632 mRNA_6264 0.11 -0.2
393,130 - 14632 mRNA_6264 0.42 0.5
393,395 - 14632 mRNA_6264 0.75 0.6
393,462 + 14632 mRNA_6264 0.83 1.0