Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6246

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6246: 14614 - Hypothetical Protein, at 345803 to 347833 14614 mRNA_6247: 14615 - K01551 arsA, ASNA1 arsenite-transporting ATPase, at 348270 to 350050 14615

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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344,865 + 0.5
345,166 - 0.4
345,186 + 0.2
345,190 + 0.8
345,341 + -0.4
345,360 - -0.5
345,374 - 0.3
345,384 - -0.1
345,392 + -0.8
345,395 - 0.2
345,407 - 0.2
345,412 - -0.3
345,420 + 1.4
345,438 - 1.3
345,455 - 1.4
345,482 + -1.6
345,506 + 0.5
345,566 - 1.7
345,570 + 0.3
345,573 - -0.4
345,579 + -0.2
345,599 - -0.3
345,601 - 1.3
345,601 - 1.2
345,603 + 0.0
345,741 - -0.2
345,749 + 0.1
345,760 + 0.4
345,768 + -0.2
345,893 + 0.6
346,228 + 14614 mRNA_6246 0.21 0.3
346,374 - 14614 mRNA_6246 0.28 -1.8
346,462 + 14614 mRNA_6246 0.32 0.7
346,464 + 14614 mRNA_6246 0.33 0.0
346,477 + 14614 mRNA_6246 0.33 0.3
346,653 + 14614 mRNA_6246 0.42 0.3
346,879 - 14614 mRNA_6246 0.53 0.7
347,239 + 14614 mRNA_6246 0.71 -0.9
347,239 + 14614 mRNA_6246 0.71 1.0
347,441 - 14614 mRNA_6246 0.81 -0.4
347,537 + 14614 mRNA_6246 0.85 0.7
347,588 - 14614 mRNA_6246 0.88 0.3
347,622 - 14614 mRNA_6246 0.90 0.2
347,780 + -0.1
347,802 - 1.6
347,803 + -0.2
347,927 - 0.7
347,935 - -0.2
348,047 - 0.9
348,135 + 1.1
348,267 - -0.1
348,439 + 0.9
348,678 + 14615 mRNA_6247 0.23 -0.7