Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6202

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6201: 14569 - Hypothetical Protein, at 236476 to 237020 14569 mRNA_6202: 14570 - KOG4475 FOG Immunoglobin and related proteins, at 237374 to 240451 14570 mRNA_6203: 14571 - HMMPfam-HbrB-like-PF08539, at 240769 to 243130 14571

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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236,377 + -0.5
236,507 - 1.6
236,539 + 14569 mRNA_6201 0.12 0.2
236,540 - 14569 mRNA_6201 0.12 0.8
236,549 + 14569 mRNA_6201 0.13 -0.2
236,561 - 14569 mRNA_6201 0.16 0.2
236,565 - 14569 mRNA_6201 0.16 0.5
236,568 + 14569 mRNA_6201 0.17 1.6
236,588 - 14569 mRNA_6201 0.21 -1.0
236,637 + 14569 mRNA_6201 0.30 0.7
236,649 - 14569 mRNA_6201 0.32 0.1
236,676 + 14569 mRNA_6201 0.37 -0.6
236,683 + 14569 mRNA_6201 0.38 0.7
236,703 - 14569 mRNA_6201 0.42 0.3
236,707 + 14569 mRNA_6201 0.42 -0.2
236,720 + 14569 mRNA_6201 0.45 0.1
236,720 + 14569 mRNA_6201 0.45 0.6
236,740 - 14569 mRNA_6201 0.48 0.4
236,813 - 14569 mRNA_6201 0.62 -1.2
236,823 + 14569 mRNA_6201 0.64 -0.0
236,842 - 14569 mRNA_6201 0.67 0.2
236,848 + 14569 mRNA_6201 0.68 0.7
236,852 + 14569 mRNA_6201 0.69 0.8
236,853 + 14569 mRNA_6201 0.69 0.5
236,858 - 14569 mRNA_6201 0.70 -0.2
236,865 - 14569 mRNA_6201 0.71 -1.5
236,866 + 14569 mRNA_6201 0.72 -0.3
236,875 + 14569 mRNA_6201 0.73 0.6
236,886 + 14569 mRNA_6201 0.75 0.0
237,000 + 0.7
237,017 + -0.1
237,024 - -0.0
237,026 + 0.1
237,026 - 1.1
237,031 + 1.1
237,303 - 0.9
237,581 - 0.7
237,602 - 0.0
237,873 + 14570 mRNA_6202 0.16 0.3
237,918 - 14570 mRNA_6202 0.18 0.1
238,484 + 14570 mRNA_6202 0.36 0.7
238,767 - 14570 mRNA_6202 0.45 -0.0
238,999 + 14570 mRNA_6202 0.53 -0.1
239,120 - 14570 mRNA_6202 0.57 -0.6
240,174 - 0.1
240,418 - 0.9
240,617 - -0.5
240,827 - -0.4
240,993 + 1.2
241,014 + 14571 mRNA_6203 0.10 0.1
241,036 + 14571 mRNA_6203 0.11 1.2
241,041 + 14571 mRNA_6203 0.12 0.2
241,156 - 14571 mRNA_6203 0.16 -0.2
241,167 - 14571 mRNA_6203 0.17 0.3