Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6199

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6198: 14566 - BLAST tyrosine kinase domain protein [Rhizoctonia solani AG..., at 229572 to 230681 14566 mRNA_6199: 14567 - HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112, at 230911 to 232731 14567 mRNA_6200: 14568 - Hypothetical Protein, at 233137 to 235524 14568

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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230,266 + 14566 mRNA_6198 0.63 0.1
230,345 + 14566 mRNA_6198 0.70 0.5
230,751 + 0.2
231,043 - 0.2
231,085 - 0.3
231,125 + 14567 mRNA_6199 0.12 0.0
231,212 - 14567 mRNA_6199 0.17 0.2
231,310 - 14567 mRNA_6199 0.22 0.4
231,435 - 14567 mRNA_6199 0.29 1.3
231,605 + 14567 mRNA_6199 0.38 0.0
231,896 - 14567 mRNA_6199 0.54 1.9
231,915 - 14567 mRNA_6199 0.55 0.0
231,922 + 14567 mRNA_6199 0.56 -0.1
232,008 - 14567 mRNA_6199 0.60 0.7
232,202 - 14567 mRNA_6199 0.71 0.2
232,335 - 14567 mRNA_6199 0.78 0.2
232,458 - 14567 mRNA_6199 0.85 -0.7
232,469 - 14567 mRNA_6199 0.86 -0.5
232,478 - 14567 mRNA_6199 0.86 -0.2
232,509 - 14567 mRNA_6199 0.88 0.3
232,514 - 14567 mRNA_6199 0.88 0.7
232,597 - -0.3
232,618 + 0.4
232,626 - -0.8
232,637 + 0.2
232,643 - 0.5
232,657 + 1.1
232,783 - 0.2
232,815 + 0.2
232,821 + -0.3
232,953 - -0.4
233,105 - 0.0