Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6187

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6187: 14555 - BLAST Cytoplasmic dynein 1 intermediate chain 1 [Wallem..., at 208221 to 211423 14555 mRNA_6188: 14556 - Hypothetical Protein, at 211596 to 212147 14556 mRNA_6189: 14557 - ProSiteProfiles-Tyrosine specific protein phosphatases family profile.-PS50056,SUPERFAMILY--SSF52799, at 212357 to 214481 14557

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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207,367 - 0.1
207,374 - -0.2
207,504 + -0.1
207,774 + -0.5
207,795 + 0.3
208,121 - -0.2
208,512 - 0.1
208,673 - 14555 mRNA_6187 0.14 -0.1
208,746 + 14555 mRNA_6187 0.16 -1.0
209,174 + 14555 mRNA_6187 0.30 -0.3
210,009 - 14555 mRNA_6187 0.56 1.2
210,260 - 14555 mRNA_6187 0.64 0.1
210,581 + 14555 mRNA_6187 0.74 1.3
210,585 + 14555 mRNA_6187 0.74 0.2
210,709 - 14555 mRNA_6187 0.78 -0.3
210,714 + 14555 mRNA_6187 0.78 -1.0
210,920 - 14555 mRNA_6187 0.84 0.3
211,001 - 14555 mRNA_6187 0.87 0.6
211,036 + 14555 mRNA_6187 0.88 0.5
211,040 + 14555 mRNA_6187 0.88 -0.1
211,142 - 0.6
211,324 - 0.4
211,465 - -0.4
211,474 + 0.7
211,498 + 0.9
211,756 + 14556 mRNA_6188 0.29 1.2
211,782 - 14556 mRNA_6188 0.34 0.9
211,828 + 14556 mRNA_6188 0.42 0.0
211,945 - 14556 mRNA_6188 0.63 0.4
211,959 + 14556 mRNA_6188 0.66 0.1
212,014 + 14556 mRNA_6188 0.76 0.3
212,029 + 14556 mRNA_6188 0.78 0.7