Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6175

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6174: 14542 - BLAST Glycoside hydrolase [Aureobasidium pullulans], at 176764 to 178095 14542 mRNA_6175: 14543 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 178357 to 180910 14543

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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177,712 + 14542 mRNA_6174 0.71 -0.6
178,108 - 0.3
178,194 + 2.4
178,223 + -0.2
178,250 + -0.7
178,526 + 0.4
178,918 + 14543 mRNA_6175 0.22 1.0
179,309 + 14543 mRNA_6175 0.37 1.1
179,350 - 14543 mRNA_6175 0.39 0.6
179,401 + 14543 mRNA_6175 0.41 0.6
179,546 + 14543 mRNA_6175 0.47 -1.2
179,550 - 14543 mRNA_6175 0.47 0.9
179,723 - 14543 mRNA_6175 0.53 -0.6
179,817 + 14543 mRNA_6175 0.57 -0.0
179,860 - 14543 mRNA_6175 0.59 0.7
180,227 + 14543 mRNA_6175 0.73 1.0
180,234 - 14543 mRNA_6175 0.73 0.2
180,241 - 14543 mRNA_6175 0.74 0.2
180,433 - 14543 mRNA_6175 0.81 0.0
180,548 + 14543 mRNA_6175 0.86 0.4
180,548 + 14543 mRNA_6175 0.86 -0.6
180,715 + 0.6
180,861 + 1.3
180,987 - 0.6
181,023 - 0.4
181,173 - 0.5
181,182 + -0.3
181,190 - 1.0
181,315 - 1.3
181,321 - 1.0
181,338 - -0.6
181,360 - 0.9
181,361 + -0.1
181,394 - 1.4
181,493 - -0.1
181,517 - -0.6
181,529 - 0.3
181,802 - -0.4