Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6170

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6169: 14537 - K20304 TRAPPC6, TRS33 trafficking protein particle complex subunit 6, at 164256 to 165475 14537 mRNA_6170: 14538 - KOG3476 Microtubule-associated protein CRIPT, at 165822 to 166606 14538 mRNA_6171: 14539 - SUPERFAMILY--SSF52047, at 166707 to 169416 14539

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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165,585 + 0.7
165,788 + -0.0
165,893 + 0.2
165,926 + 14538 mRNA_6170 0.13 0.4
165,936 + 14538 mRNA_6170 0.15 0.3
166,064 + 14538 mRNA_6170 0.31 0.1
166,096 + 14538 mRNA_6170 0.35 0.2
166,207 - 14538 mRNA_6170 0.49 -0.1
166,361 + 14538 mRNA_6170 0.69 1.2
166,616 - 0.2
166,624 - 1.4
166,639 + 0.9
166,653 + 0.0
166,655 - -0.3
166,655 - -0.5
166,665 - 2.0
167,119 - 14539 mRNA_6171 0.15 0.3
167,208 - 14539 mRNA_6171 0.18 2.2
167,238 + 14539 mRNA_6171 0.20 0.9
167,258 - 14539 mRNA_6171 0.20 0.3
167,270 + 14539 mRNA_6171 0.21 0.3
167,384 - 14539 mRNA_6171 0.25 1.1
167,411 - 14539 mRNA_6171 0.26 1.7