Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6117

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6116: 14484 - Hypothetical Protein, at 27856 to 28790 14484 mRNA_6117: 14485 - BLAST expressed protein [Schizophyllum commune H4-8], at 29394 to 30967 14485 mRNA_6118: 14486 - K03164 TOP2 DNA topoisomerase II, at 31417 to 38158 14486

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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28,481 + 14484 mRNA_6116 0.67 -0.2
28,671 - 14484 mRNA_6116 0.87 2.7
28,724 + 0.5
28,965 + -0.3
29,023 - 1.2
29,091 + 0.1
29,123 - -0.2
29,142 + 0.8
29,394 - -0.2
29,527 - 0.2
29,785 - 14485 mRNA_6117 0.25 -1.4
29,935 - 14485 mRNA_6117 0.34 0.4
30,340 - 14485 mRNA_6117 0.60 0.3
30,935 + 0.1
31,090 + -0.5
31,217 - 0.7
31,353 + -0.1
31,360 - 1.5
31,371 + -0.3
31,373 + -0.0
31,389 - 0.3
31,502 - -0.2