Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6111

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6110: 14478 - Hypothetical Protein, at 15067 to 15769 14478 mRNA_6111: 14479 - Hypothetical Protein, at 16061 to 17629 14479 mRNA_6112: 14480 - K01785 galM, GALM aldose 1-epimerase, at 17714 to 19844 14480

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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15,116 - 0.4
15,117 + 0.2
15,118 + 0.6
15,130 + -0.5
15,245 - 14478 mRNA_6110 0.25 0.7
15,256 + 14478 mRNA_6110 0.27 1.4
15,281 - 14478 mRNA_6110 0.30 -0.1
15,308 + 14478 mRNA_6110 0.34 -1.0
15,311 + 14478 mRNA_6110 0.35 -0.1
15,544 - 14478 mRNA_6110 0.68 -0.4
15,693 - 14478 mRNA_6110 0.89 0.3
15,705 + -0.8
15,765 - 0.8
15,862 + 0.5
16,319 + 14479 mRNA_6111 0.16 0.5
16,533 + 14479 mRNA_6111 0.30 0.2
16,535 - 14479 mRNA_6111 0.30 -0.6
16,665 + 14479 mRNA_6111 0.38 0.1
16,681 + 14479 mRNA_6111 0.40 0.3
16,681 + 14479 mRNA_6111 0.40 0.7
16,689 + 14479 mRNA_6111 0.40 1.1
16,719 + 14479 mRNA_6111 0.42 1.1
16,817 + 14479 mRNA_6111 0.48 -0.2
16,983 - 14479 mRNA_6111 0.59 -1.1
17,034 + 14479 mRNA_6111 0.62 1.3
17,141 + 14479 mRNA_6111 0.69 0.3
17,177 - 14479 mRNA_6111 0.71 1.3
17,181 + 14479 mRNA_6111 0.71 -0.1
17,236 + 14479 mRNA_6111 0.75 -0.7
17,259 + 14479 mRNA_6111 0.76 -0.3
17,567 + -0.9
17,865 - -0.3
18,020 - 14480 mRNA_6112 0.14 0.0
18,077 + 14480 mRNA_6112 0.17 -0.1
18,276 + 14480 mRNA_6112 0.26 0.7
18,462 + 14480 mRNA_6112 0.35 -0.8
18,464 - 14480 mRNA_6112 0.35 0.9
18,586 + 14480 mRNA_6112 0.41 0.5
18,589 - 14480 mRNA_6112 0.41 -0.4
18,596 + 14480 mRNA_6112 0.41 -0.9
18,598 - 14480 mRNA_6112 0.41 -1.1