Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6109

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6109: 14477 - KOG1477 SPRY domain-containing proteins, at 12198 to 14626 14477 mRNA_6110: 14478 - Hypothetical Protein, at 15067 to 15769 14478

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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11,235 - 0.2
11,402 + 0.7
11,634 - -0.1
12,059 + 0.0
12,218 + -0.2
12,415 + -0.6
12,450 + 14477 mRNA_6109 0.10 0.4
12,638 + 14477 mRNA_6109 0.18 0.1
12,767 + 14477 mRNA_6109 0.23 0.3
13,069 - 14477 mRNA_6109 0.36 2.3
13,367 + 14477 mRNA_6109 0.48 0.5
13,520 + 14477 mRNA_6109 0.54 1.3
13,649 - 14477 mRNA_6109 0.60 1.7
13,815 - 14477 mRNA_6109 0.67 0.8
13,929 - 14477 mRNA_6109 0.71 0.2
13,983 - 14477 mRNA_6109 0.73 0.3
14,377 + 14477 mRNA_6109 0.90 0.4
14,420 + -0.8
14,518 - -0.5
14,520 + 1.3
14,652 + -0.1
14,654 - 0.4
14,676 + 2.0
14,687 + -0.1
14,782 - 1.0
14,806 - 0.9
14,921 + 0.3
14,942 - 0.3
14,949 + -0.4
14,979 - 0.9
14,986 - 0.4
15,116 - 0.4
15,117 + 0.2
15,118 + 0.6
15,130 + -0.5
15,245 - 14478 mRNA_6110 0.25 0.7
15,256 + 14478 mRNA_6110 0.27 1.4
15,281 - 14478 mRNA_6110 0.30 -0.1
15,308 + 14478 mRNA_6110 0.34 -1.0
15,311 + 14478 mRNA_6110 0.35 -0.1
15,544 - 14478 mRNA_6110 0.68 -0.4