Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6061

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6060: 14428 - K14806 DDX31, DBP7 ATP-dependent RNA helicase DDX31/DBP7, at 1545467 to 1548419 14428 mRNA_6061: 14429 - KOG3772 M-phase inducer phosphatase, at 1548729 to 1549422 14429 mRNA_6062: 14430 - K11121 SIR2 NAD-dependent histone deacetylase SIR2, at 1549948 to 1551724 14430

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,548,344 - 0.9
1,548,492 - 0.8
1,548,501 - 0.7
1,548,515 - -0.0
1,548,515 - 2.4
1,548,520 + 0.3
1,548,527 + 1.1
1,548,553 + 1.1
1,548,577 + 0.6
1,548,675 - -0.8
1,548,690 + -1.4
1,548,709 + 1.8
1,548,833 + 14429 mRNA_6061 0.15 -0.6
1,548,880 + 14429 mRNA_6061 0.22 1.2
1,549,021 + 14429 mRNA_6061 0.42 0.1
1,549,245 + 14429 mRNA_6061 0.74 0.9
1,549,546 + 0.2
1,549,707 + -0.0
1,549,711 + 0.4
1,549,888 - -0.2
1,549,892 - 0.7
1,550,044 - 0.1