Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6008

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6007: 14375 - Hypothetical Protein, at 1439226 to 1440523 14375 mRNA_6008: 14376 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 1440694 to 1441642 14376 mRNA_6009: 14377 - K13939 FOL1 dihydroneopterin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase / dihydropteroate synthase, at 1442140 to 1444838 14377

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,439,728 - 14375 mRNA_6007 0.39 0.5
1,440,588 - -0.4
1,440,678 + 1.8
1,440,764 + 0.3
1,441,059 - 14376 mRNA_6008 0.38 -0.0
1,441,065 - 14376 mRNA_6008 0.39 -0.4
1,441,182 + 14376 mRNA_6008 0.51 0.1
1,441,319 - 14376 mRNA_6008 0.66 -0.1
1,441,666 + 0.1
1,441,672 - 0.4
1,441,758 - -0.4
1,441,781 + 0.5
1,441,813 + -0.5
1,441,816 + 1.3
1,441,824 + -0.2
1,441,845 - 0.8
1,441,890 + -1.4
1,441,896 - 0.3
1,441,927 + -0.3
1,442,014 - -0.2
1,442,135 + -0.1