Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5933

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5933: 14301 - SUPERFAMILY--SSF51126, at 1266869 to 1268786 14301 mRNA_5934: 14302 - HMMPfam-Mitochondrial carrier protein-PF00153,ProSiteProfiles-Solute carrier (Solcar) repeat profile.-PS50920,SUPERFAMILY--SSF103506, at 1269000 to 1270285 14302

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,265,877 - 0.2
1,265,892 - 0.1
1,265,898 - -1.0
1,265,911 + 0.2
1,265,924 - 1.0
1,265,926 + 1.0
1,265,928 + 0.1
1,265,929 + 0.5
1,265,932 + -0.9
1,265,933 - -0.1
1,265,937 + -2.3
1,265,947 - 0.6
1,265,951 - 0.5
1,265,958 - 0.4
1,265,970 + -0.7
1,265,970 + 0.3
1,265,971 - 0.3
1,265,979 - -0.0
1,265,980 - -0.9
1,266,002 - -0.2
1,266,072 + 0.4
1,266,075 - 0.1
1,266,075 - -0.5
1,266,076 + 1.0
1,266,080 + -0.2
1,266,088 - 0.2
1,266,092 - 0.1
1,266,095 + 1.1
1,266,097 + 1.9
1,266,106 + 0.5
1,266,108 - 0.1
1,266,116 + 0.1
1,266,120 - 0.9
1,266,132 + 1.7
1,266,137 - 0.5
1,266,149 - 1.2
1,266,151 + 1.0
1,266,171 - -0.4
1,266,178 + 1.1
1,266,180 - -0.1
1,266,185 + 0.2
1,266,190 + 0.1
1,266,193 - 1.8
1,266,197 + 0.5
1,266,200 - -0.4
1,266,204 + 0.2
1,266,206 + 0.6
1,266,214 - -0.2
1,266,217 - 0.3
1,266,218 - 0.0
1,266,234 - 0.3
1,266,239 - 0.4
1,266,240 + -0.3
1,266,247 + 1.1
1,266,255 - 0.5
1,266,271 - 0.6
1,266,272 - -0.1
1,266,274 + 1.4
1,266,279 + 0.4
1,266,283 + 0.5
1,266,287 + -0.5
1,266,289 - 0.5
1,266,289 - 0.8
1,266,291 - 0.5
1,266,295 + 0.8
1,266,298 + 0.3
1,266,303 - 0.9
1,266,309 + -0.1
1,266,314 - 0.0
1,266,320 - 0.2
1,266,324 + 0.5
1,266,327 - 0.3
1,266,328 + -0.1
1,266,332 - 0.5
1,266,337 - -0.5
1,266,343 + 0.2
1,266,344 - 2.0
1,266,346 + 0.8
1,266,357 - -0.5
1,266,362 - 0.6
1,266,370 - -0.1
1,266,389 + 0.4
1,266,396 + 0.2
1,266,425 - 0.6
1,266,427 + -0.2
1,266,433 - 0.1
1,266,434 + 0.0
1,266,437 + -0.2
1,266,441 - 0.2
1,266,442 - -0.1
1,266,442 + -0.8
1,266,443 + -0.1
1,266,460 - 0.3
1,266,460 - 0.5
1,266,463 + 0.3
1,266,479 + 0.3
1,266,480 + 1.2
1,266,483 - 0.4
1,266,485 - 1.1
1,266,492 + -0.8
1,266,500 + 0.8
1,266,521 - 0.4
1,266,524 - -0.6
1,266,572 - 0.2
1,266,579 + 0.1
1,266,588 + -0.1
1,266,598 + 0.2
1,266,599 + 0.1
1,266,617 + 0.2
1,266,624 - -0.1
1,266,634 + 0.3
1,266,646 - 0.3
1,266,650 - 0.8
1,266,663 + 0.6
1,266,673 - -0.0
1,266,677 - 0.5
1,266,697 + 0.2
1,266,810 - 0.1
1,266,815 - 0.6
1,266,818 - -0.0
1,266,837 - -0.2
1,266,857 + 0.7
1,266,962 - 0.1
1,267,113 + 14301 mRNA_5933 0.13 -0.2
1,267,123 + 14301 mRNA_5933 0.13 0.1
1,267,267 - 14301 mRNA_5933 0.21 -0.2
1,267,409 + 14301 mRNA_5933 0.28 0.2
1,267,583 - 14301 mRNA_5933 0.37 0.2
1,269,148 + 14302 mRNA_5934 0.12 0.4
1,269,541 - 14302 mRNA_5934 0.42 0.2
1,269,723 - 14302 mRNA_5934 0.56 1.0
1,269,783 + 14302 mRNA_5934 0.61 1.2