Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5915

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5914: 14282 - HMMPfam-Nuclear protein Es2-PF09751, at 1232293 to 1234588 14282 mRNA_5915: 14283 - HMMPfam-Tannase and feruloyl esterase-PF07519,SUPERFAMILY--SSF53474, at 1235017 to 1236924 14283

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,234,602 - -0.3
1,234,640 - -0.1
1,234,642 + 0.6
1,234,662 - 0.6
1,234,763 + 0.6
1,234,777 - 2.0
1,235,077 + 0.3
1,235,235 + 14283 mRNA_5915 0.11 0.6
1,235,495 + 14283 mRNA_5915 0.25 0.9
1,235,532 - 14283 mRNA_5915 0.27 0.4
1,235,561 - 14283 mRNA_5915 0.29 -1.3
1,235,815 - 14283 mRNA_5915 0.42 1.5
1,235,972 + 14283 mRNA_5915 0.50 0.3
1,236,074 - 14283 mRNA_5915 0.55 1.2
1,236,086 + 14283 mRNA_5915 0.56 0.4
1,236,089 - 14283 mRNA_5915 0.56 0.4
1,236,114 - 14283 mRNA_5915 0.57 -0.1
1,236,242 - 14283 mRNA_5915 0.64 0.9
1,236,249 + 14283 mRNA_5915 0.65 1.1
1,236,258 + 14283 mRNA_5915 0.65 0.3
1,236,271 - 14283 mRNA_5915 0.66 1.1
1,236,386 + 14283 mRNA_5915 0.72 -0.0
1,236,389 - 14283 mRNA_5915 0.72 1.0
1,236,812 + 1.2
1,236,851 - -0.8
1,236,974 - -0.2
1,237,372 - 0.5
1,237,517 + 1.8
1,237,669 - -0.1
1,237,670 + 0.3
1,237,697 + 0.0
1,237,705 - 0.2
1,237,705 + 0.1
1,237,706 - 0.6
1,237,831 - 0.9
1,237,832 + -0.2
1,237,847 - 0.9
1,237,851 - 0.2
1,237,854 + 0.2