Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5902

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5901: 14269 - K07204 RAPTOR regulatory associated protein of mTOR, at 1201265 to 1206244 14269 mRNA_5902: 14270 - K08336 ATG12 ubiquitin-like protein ATG12, at 1206662 to 1207258 14270 mRNA_5903: 14271 - SMART-Parallel beta-helix repeats-SM00710,SUPERFAMILY--SSF51126, at 1207827 to 1210876 14271

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,206,267 - -1.6
1,206,404 - -0.6
1,206,412 - -1.6
1,206,415 + 0.5
1,206,534 - -0.7
1,206,547 + -0.8
1,206,719 + 0.3
1,206,841 - 14270 mRNA_5902 0.30 -0.6
1,207,139 - 14270 mRNA_5902 0.80 -0.0
1,207,299 - -3.1
1,207,670 - -0.0
1,207,759 - 0.3
1,208,188 + 14271 mRNA_5903 0.12 -0.0
1,208,192 - 14271 mRNA_5903 0.12 -1.1
1,208,195 - 14271 mRNA_5903 0.12 0.3
1,208,196 + 14271 mRNA_5903 0.12 -0.8