Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5899

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5898: 14266 - Hypothetical Protein, at 1194829 to 1196243 14266 mRNA_5899: 14267 - K00038 E1.1.1.53 3alpha(or 20beta)-hydroxysteroid dehydrogenase, at 1196510 to 1197611 14267

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,195,738 + 14266 mRNA_5898 0.64 0.1
1,195,857 + 14266 mRNA_5898 0.73 -0.3
1,196,175 - 0.5
1,196,303 - 0.6
1,196,323 + 0.4
1,196,442 + 0.6
1,196,462 - 0.6
1,196,475 - 0.5
1,196,643 + 14267 mRNA_5899 0.12 0.9
1,196,643 - 14267 mRNA_5899 0.12 0.0
1,196,768 - 14267 mRNA_5899 0.23 0.4
1,196,829 - 14267 mRNA_5899 0.29 -0.2
1,196,907 + 14267 mRNA_5899 0.36 0.6
1,196,933 + 14267 mRNA_5899 0.38 0.1
1,197,081 - 14267 mRNA_5899 0.52 0.3
1,197,348 + 14267 mRNA_5899 0.76 0.3
1,197,354 - 14267 mRNA_5899 0.77 1.4
1,197,500 - 14267 mRNA_5899 0.90 -0.3
1,197,944 + 0.4
1,198,097 - 0.5
1,198,424 - -0.3
1,198,559 + 0.8
1,198,600 + 0.6