Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5870

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5869: 14237 - K10808 RRM2 ribonucleoside-diphosphate reductase subunit M2, at 1124723 to 1126548 14237 mRNA_5870: 14238 - Hypothetical Protein, at 1126742 to 1127263 14238 mRNA_5871: 14239 - HMMPfam-zinc finger of C3HC4-type, RING-PF15227,ProSitePatterns-Zinc finger RING-type signature.-PS00518,ProSiteProfiles-Zinc finger RING-type profile.-PS50089,SMART-Ring finger-SM00184,SUPERFAMILY--SSF57850, at 1127844 to 1131373 14239

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,126,638 + -0.8
1,126,649 + 0.5
1,126,659 + 1.0
1,126,668 + -0.5
1,126,668 + 0.6
1,126,670 - 0.6
1,126,670 - 0.0
1,126,686 + -0.3
1,126,686 + -0.2
1,126,701 - 0.9
1,126,712 - -0.1
1,126,726 - 0.3
1,126,739 - -0.0
1,126,744 + 0.5
1,126,790 + -0.0
1,126,795 - 14238 mRNA_5870 0.10 0.4
1,126,796 + 14238 mRNA_5870 0.10 1.0
1,126,813 + 14238 mRNA_5870 0.14 0.9
1,126,814 + 14238 mRNA_5870 0.14 -0.0
1,126,967 - 14238 mRNA_5870 0.43 -0.2
1,126,972 - 14238 mRNA_5870 0.44 0.0
1,127,106 - 14238 mRNA_5870 0.70 0.7
1,127,114 - 14238 mRNA_5870 0.71 0.1
1,127,143 - 14238 mRNA_5870 0.77 -0.2
1,127,145 + 14238 mRNA_5870 0.77 0.2
1,127,699 - -0.1
1,127,726 + 0.6
1,127,875 - -0.2