Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5824

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5823: 14191 - SUPERFAMILY--SSF52047, at 1027877 to 1028999 14191 mRNA_5824: 14192 - Hypothetical Protein, at 1029924 to 1031060 14192 mRNA_5825: 14193 - Hypothetical Protein, at 1031671 to 1033379 14193

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,029,106 + 0.6
1,029,117 - 0.5
1,029,159 - 0.1
1,029,294 + -0.1
1,029,405 + -0.0
1,029,425 + -0.6
1,029,438 + 0.6
1,029,459 - 0.5
1,029,464 + 0.9
1,029,486 + -0.3
1,029,548 + 0.3
1,029,568 - 0.3
1,029,738 + 0.3
1,029,749 + 0.0
1,029,756 + -0.0
1,029,782 + -0.4
1,029,786 + 0.0
1,029,876 - -0.3
1,030,022 + -0.5
1,030,171 - 14192 mRNA_5824 0.22 1.8
1,030,179 - 14192 mRNA_5824 0.22 0.1
1,030,184 - 14192 mRNA_5824 0.23 1.0
1,030,309 - 14192 mRNA_5824 0.34 -0.4
1,030,310 + 14192 mRNA_5824 0.34 -1.4
1,030,336 + 14192 mRNA_5824 0.36 2.3
1,030,349 - 14192 mRNA_5824 0.37 -0.5
1,030,352 - 14192 mRNA_5824 0.38 0.8
1,030,481 + 14192 mRNA_5824 0.49 0.3
1,030,485 + 14192 mRNA_5824 0.49 -0.2
1,030,486 + 14192 mRNA_5824 0.49 -0.3
1,030,499 - 14192 mRNA_5824 0.51 0.8
1,030,505 + 14192 mRNA_5824 0.51 -0.3
1,030,506 + 14192 mRNA_5824 0.51 0.9
1,030,509 - 14192 mRNA_5824 0.51 0.6
1,030,510 + 14192 mRNA_5824 0.52 0.3
1,030,512 - 14192 mRNA_5824 0.52 0.3
1,030,515 - 14192 mRNA_5824 0.52 -1.3
1,030,536 - 14192 mRNA_5824 0.54 1.3
1,030,611 - 14192 mRNA_5824 0.60 0.7
1,030,627 + 14192 mRNA_5824 0.62 -0.2
1,030,631 - 14192 mRNA_5824 0.62 0.1
1,030,660 + 14192 mRNA_5824 0.65 0.3
1,030,660 - 14192 mRNA_5824 0.65 2.1
1,030,666 - 14192 mRNA_5824 0.65 0.9
1,030,669 - 14192 mRNA_5824 0.66 -0.5
1,030,670 + 14192 mRNA_5824 0.66 -0.2
1,030,671 - 14192 mRNA_5824 0.66 -0.1
1,030,675 - 14192 mRNA_5824 0.66 0.7
1,030,680 + 14192 mRNA_5824 0.66 -0.8
1,030,682 + 14192 mRNA_5824 0.67 0.1
1,030,683 + 14192 mRNA_5824 0.67 -0.4
1,030,688 + 14192 mRNA_5824 0.67 1.1
1,030,691 - 14192 mRNA_5824 0.67 1.4
1,030,692 - 14192 mRNA_5824 0.68 0.2
1,030,731 + 14192 mRNA_5824 0.71 1.5
1,030,787 + 14192 mRNA_5824 0.76 -0.1
1,030,812 - 14192 mRNA_5824 0.78 1.1
1,030,814 + 14192 mRNA_5824 0.78 -0.1
1,030,828 + 14192 mRNA_5824 0.80 0.6
1,030,833 + 14192 mRNA_5824 0.80 0.7
1,030,837 - 14192 mRNA_5824 0.80 1.0
1,030,846 - 14192 mRNA_5824 0.81 0.7
1,030,868 + 14192 mRNA_5824 0.83 0.7
1,030,945 + 14192 mRNA_5824 0.90 0.4
1,030,956 - 0.3
1,030,967 + 0.1
1,030,978 + 0.4
1,030,983 - 0.2
1,030,992 + 0.6
1,030,994 - 0.5
1,030,997 + 0.3
1,031,007 - 1.5
1,031,008 + 0.1
1,031,008 - 1.5
1,031,009 + 0.1
1,031,011 + -0.0
1,031,013 + 0.1
1,031,014 - 0.6
1,031,014 + 1.0
1,031,017 + 0.2
1,031,020 - 0.5
1,031,022 - 0.2
1,031,032 + -0.4
1,031,032 + 0.6
1,031,035 + 0.3
1,031,038 - 1.4
1,031,041 + -0.5
1,031,048 + 0.3
1,031,049 - 0.4
1,031,050 + -0.1
1,031,056 - 0.2
1,031,058 + -1.0
1,031,068 + -0.5
1,031,069 - 0.8
1,031,072 + 0.3
1,031,073 + 0.1
1,031,142 - 0.1
1,031,178 + -0.1
1,031,186 + 0.1
1,031,198 + -0.1
1,031,204 - 0.0
1,031,216 + -0.1
1,031,338 - -0.7
1,031,353 - -1.2
1,031,467 - 0.0
1,031,468 + -0.0
1,031,502 - -0.5
1,031,575 - 0.1
1,031,576 - 0.4
1,031,580 - 1.7
1,031,582 + -1.1
1,031,584 - -0.1
1,031,606 + 0.1
1,031,607 - -0.3
1,031,630 - 0.5
1,031,634 - 0.3
1,031,641 - 1.3
1,031,650 + 0.3
1,031,680 - 0.2
1,031,701 - 0.5
1,031,702 + 0.5