Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5782

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5781: 14149 - HMMPfam-Protein of unknown function (DUF3533)-PF12051, at 928807 to 930630 14149 mRNA_5782: 14150 - HMMPfam-Protein of unknown function (DUF3533)-PF12051, at 931244 to 933171 14150 mRNA_5783: 14151 - KOG4623 Uncharacterized conserved protein, at 933374 to 935462 14151

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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930,316 + 14149 mRNA_5781 0.83 -0.2
930,548 - 0.3
930,713 - 0.4
930,834 + 0.2
930,893 - -0.9
931,019 - -0.3
931,039 - 0.3
931,047 + -0.2
931,047 + -0.2
931,049 + 0.3
931,628 - 14150 mRNA_5782 0.20 1.4
931,685 - 14150 mRNA_5782 0.23 -0.5
931,919 + 14150 mRNA_5782 0.35 1.6
932,194 - 14150 mRNA_5782 0.49 0.3
932,205 - 14150 mRNA_5782 0.50 1.1
932,209 - 14150 mRNA_5782 0.50 0.4
932,229 + 14150 mRNA_5782 0.51 1.3
932,371 + 14150 mRNA_5782 0.58 -0.4
932,375 - 14150 mRNA_5782 0.59 -0.7
932,489 + 14150 mRNA_5782 0.65 0.5
933,109 - 1.3
933,121 + -0.1
933,146 + 0.7
933,342 - -0.4
933,390 + -0.9
933,423 - 0.3
933,525 - 0.6
933,599 - 14151 mRNA_5783 0.11 -0.7
933,953 - 14151 mRNA_5783 0.28 -0.6