Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5765

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5764: 14132 - K07404 pgl 6-phosphogluconolactonase, at 886498 to 887807 14132 mRNA_5765: 14133 - Interpro Promethin, at 888017 to 888883 14133 mRNA_5766: 14134 - SUPERFAMILY--SSF52058, at 888957 to 890660 14134

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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887,180 - 14132 mRNA_5764 0.52 0.6
887,265 + 14132 mRNA_5764 0.59 0.3
887,292 + 14132 mRNA_5764 0.61 1.0
887,426 - 14132 mRNA_5764 0.71 0.4
887,476 + 14132 mRNA_5764 0.75 -0.0
887,735 + -0.8
887,751 + 0.2
887,751 - 0.3
887,862 - 0.1
887,865 - 0.2
887,868 + -1.1
887,884 + -0.6
887,890 + 1.0
887,894 - 1.1
887,895 + -0.6
887,895 + 1.6
887,901 + 1.4
887,904 - 0.5
887,923 + 0.4
888,201 + 14133 mRNA_5765 0.21 -0.4
888,513 + 14133 mRNA_5765 0.57 0.3
888,586 + 14133 mRNA_5765 0.66 -0.7
888,611 + 14133 mRNA_5765 0.69 0.2
888,612 - 14133 mRNA_5765 0.69 0.7
888,628 + 14133 mRNA_5765 0.70 0.4
888,643 + 14133 mRNA_5765 0.72 1.2
888,733 - 14133 mRNA_5765 0.83 -0.3
888,773 - 14133 mRNA_5765 0.87 0.3
888,891 + 0.4
888,929 - -0.4
889,057 + 1.5
889,057 + -0.3
889,070 - 0.6
889,291 - 14134 mRNA_5766 0.20 -0.7
889,670 - 14134 mRNA_5766 0.42 0.3