Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5761

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5760: 14128 - K14015 NPLOC4, NPL4 nuclear protein localization protein 4 homolog, at 878316 to 881175 14128 mRNA_5761: 14129 - K14997 SLC38A11 solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 11, at 881466 to 883589 14129 mRNA_5762: 14130 - SUPERFAMILY--SSF47095, at 884263 to 884826 14130

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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881,224 - 0.4
881,295 - 0.1
881,359 - 0.3
881,372 + 0.6
881,379 - 0.6
881,433 - 0.1
881,893 + 14129 mRNA_5761 0.20 0.8
881,896 - 14129 mRNA_5761 0.20 -0.3
882,061 + 14129 mRNA_5761 0.28 -0.3
882,090 - 14129 mRNA_5761 0.29 0.3
882,655 - 14129 mRNA_5761 0.56 0.6
882,682 + 14129 mRNA_5761 0.57 0.3
882,817 - 14129 mRNA_5761 0.64 0.6
883,024 + 14129 mRNA_5761 0.73 1.6
883,126 - 14129 mRNA_5761 0.78 0.5
883,280 - 14129 mRNA_5761 0.85 -0.5
883,283 - 14129 mRNA_5761 0.86 -0.8
883,397 - 0.7
883,460 - 0.3
883,549 - -0.5
883,550 + -0.5
883,562 + -0.5
883,566 + -0.1
883,704 - 0.4
883,706 - 0.7
883,713 - 0.4
883,730 - -0.7
883,733 - 1.5
883,735 - -0.9
883,743 + -0.2
883,745 + -0.9
883,748 + 2.6
883,748 + 1.0
883,748 - -1.4
883,753 - 0.7
883,768 + -0.4
883,835 + 0.4
883,878 - 1.0
884,054 - 0.5
884,252 + -1.0
884,298 - 0.2
884,333 + 14130 mRNA_5762 0.12 -0.4
884,496 - 14130 mRNA_5762 0.41 0.0