Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5620

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5619: 13987 - K09885 AQPF aquaporin rerated protein, other eukaryote, at 526532 to 528365 13987 mRNA_5620: 13988 - HMMPfam-GRF zinc finger-PF06839, at 528663 to 529956 13988 mRNA_5621: 13989 - Hypothetical Protein, at 530337 to 531503 13989

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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527,798 - 13987 mRNA_5619 0.69 0.8
527,873 + 13987 mRNA_5619 0.73 0.9
528,041 - 13987 mRNA_5619 0.82 -1.5
528,079 + 13987 mRNA_5619 0.84 1.1
528,190 + 0.6
528,533 + 2.1
528,808 - 13988 mRNA_5620 0.11 1.8
529,954 - -1.3
529,955 + 0.2
529,957 + 0.1
529,966 - 0.2
530,050 + -1.5
530,081 - 0.3
530,082 + 0.4
530,083 + -0.3
530,136 + 1.7