Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5618

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5617: 13985 - BLAST beta-flanking protein [Kwoniella dejecticola CBS ..., at 522586 to 523883 13985 mRNA_5618: 13986 - K09866 AQP4 aquaporin-4, at 524423 to 526190 13986 mRNA_5619: 13987 - K09885 AQPF aquaporin rerated protein, other eukaryote, at 526532 to 528365 13987

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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523,728 + 13985 mRNA_5617 0.88 -0.3
523,832 - 2.2
523,985 - -0.3
524,050 + -1.1
524,100 - -0.1
524,192 + -0.2
524,544 + 0.1
524,665 - 13986 mRNA_5618 0.14 0.2
524,682 - 13986 mRNA_5618 0.15 2.4
524,810 + 13986 mRNA_5618 0.22 2.2
525,108 + 13986 mRNA_5618 0.39 0.5
525,135 + 13986 mRNA_5618 0.40 0.2
525,372 - 13986 mRNA_5618 0.54 0.7
525,712 + 13986 mRNA_5618 0.73 0.7
526,607 + 0.7