Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5612

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5611: 13979 - HMMPfam-Protein of unknown function (DUF2433)-PF10360, at 507663 to 510497 13979 mRNA_5612: 13980 - K14213 PEPD Xaa-Pro dipeptidase, at 510647 to 512391 13980 mRNA_5613: 13981 - K03035 PSMD12, RPN5 26S proteasome regulatory subunit N5, at 512639 to 514652 13981

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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510,099 + 13979 mRNA_5611 0.86 0.3
510,378 - -0.5
510,716 - 0.1
511,012 - 13980 mRNA_5612 0.21 -1.3
511,029 - 13980 mRNA_5612 0.22 -0.4
511,464 - 13980 mRNA_5612 0.47 1.1
511,636 - 13980 mRNA_5612 0.57 0.5
512,057 - 13980 mRNA_5612 0.81 1.8
512,192 + 13980 mRNA_5612 0.89 2.2
512,215 - 13980 mRNA_5612 0.90 0.7
512,345 - 0.5
512,345 - 1.5
512,352 + 1.6
512,372 - -0.2
512,375 + 1.5
512,519 - 1.3
512,533 - 0.9