Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5591

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5591: 13959 - K11182 AOC1, ABP1 diamine oxidase, at 458129 to 461343 13959 mRNA_5592: 13960 - HMMPfam-Alcohol acetyltransferase-PF07247,SUPERFAMILY--SSF52777, at 461599 to 463064 13960

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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457,260 + 0.4
457,327 + 2.3
457,332 + 0.2
457,442 - 1.2
457,454 - -0.7
457,465 + 1.4
457,468 + 1.2
457,596 + 0.1
457,642 + -0.7
457,706 + 0.9
457,757 - -0.0
457,909 - 0.4
457,998 - 1.0
458,023 + 0.0
458,024 - -0.2
458,051 - 0.4
458,055 - 1.1
458,058 + 0.2
459,071 - 13959 mRNA_5591 0.29 0.7
459,203 + 13959 mRNA_5591 0.33 -0.1
459,203 + 13959 mRNA_5591 0.33 -1.6
459,226 + 13959 mRNA_5591 0.34 -0.9
459,335 - 13959 mRNA_5591 0.38 0.6
459,384 + 13959 mRNA_5591 0.39 0.2
459,390 - 13959 mRNA_5591 0.39 1.5
459,777 - 13959 mRNA_5591 0.51 0.4
459,795 + 13959 mRNA_5591 0.52 0.9
460,080 - 13959 mRNA_5591 0.61 -1.1
460,085 + 13959 mRNA_5591 0.61 0.4
460,492 - 13959 mRNA_5591 0.73 -0.7
460,521 - 13959 mRNA_5591 0.74 -0.6
460,954 - 13959 mRNA_5591 0.88 0.3
461,214 - 0.2
461,232 - 1.7
461,497 + -0.1
461,497 + 0.9
461,562 - 1.5
461,686 - 1.1
461,697 - -0.0
461,953 - 13960 mRNA_5592 0.24 -0.9
462,286 - 13960 mRNA_5592 0.47 0.7
462,330 + 13960 mRNA_5592 0.50 -0.2